STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114867485Hypoxia-inducible factor 1-alpha-like. (672 aa)    
Predicted Functional Partners:
vhl
Von Hippel-Lindau tumor suppressor.
    
 0.971
ENSBSLP00000034375
Elongin C paralog a.
    
 0.932
ubxn7
UBX domain protein 7.
    
 0.907
arnt2
Aryl hydrocarbon receptor nuclear translocator 2.
   
0.906
LOC114843536
Aryl hydrocarbon receptor nuclear translocator-like.
   
0.906
cul2
Cullin 2.
    
 0.898
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 0.896
egln1
Egl-9 family hypoxia inducible factor 1.
    
 0.878
LOC114867698
Egl nine homolog 2-like.
    
 0.878
egln3
Egl-9 family hypoxia inducible factor 3.
    
 0.878
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.