STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC11485467614 kDa phosphohistidine phosphatase-like. (132 aa)    
Predicted Functional Partners:
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
    0.810
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7.
   
    0.756
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.744
ndufa11
NADH:ubiquinone oxidoreductase subunit A11.
   
    0.739
clpp
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
   
    0.696
ndufa7
NADH:ubiquinone oxidoreductase subunit A7.
   
    0.688
ndufb11
NADH:ubiquinone oxidoreductase subunit B11.
   
    0.620
tmem147
Transmembrane protein 147.
   
    0.617
LOC114864313
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
   
    0.613
NDUFS8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
   
    0.613
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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