STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
villVillin like. (897 aa)    
Predicted Functional Partners:
cog8
Component of oligomeric golgi complex 8.
    
 0.904
cog6
Component of oligomeric golgi complex 6.
    
 0.900
cog3
Component of oligomeric golgi complex 3.
    
 0.896
cog4
Component of oligomeric golgi complex 4.
    
 0.779
smim7
Small integral membrane protein 7.
    
 0.779
LOC114870611
Peripheral plasma membrane protein CASK-like.
   
  0.709
cask
Calcium/calmodulin dependent serine protein kinase.
   
  0.709
myo3a
Myosin IIIA.
     
 0.591
whrn
Whirlin.
     
 0.533
LOC114853263
Gelsolin-like.
  
  
 
0.501
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.