STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000005724annotation not available (1232 aa)    
Predicted Functional Partners:
tep1
Telomerase associated protein 1.
   
  0.933
LOC114846193
Probable endonuclease 4.
   
 0.791
nthl1
Nth like DNA glycosylase 1.
  
 0.705
pcna
Proliferating cell nuclear antigen.
  
 0.703
ENSBSLP00000050458
Small nuclear ribonucleoprotein D3 polypeptide, like.
   
 0.674
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.668
mutyh
mutY DNA glycosylase.
   
 0.667
ogg1
8-oxoguanine DNA glycosylase.
  
 0.663
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.636
ung
Uracil DNA glycosylase.
  
 0.633
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.