STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870040Neuropilin-2-like. (940 aa)    
Predicted Functional Partners:
LOC114864748
Platelet-derived growth factor receptor-like protein.
     
 0.700
pdgfrl
Platelet derived growth factor receptor like.
     
 0.700
flt1
Fms related tyrosine kinase 1.
     
 0.699
kdr
Kinase insert domain receptor.
     
 0.699
flt4
Fms related tyrosine kinase 4.
     
 0.699
LOC114863916
Vascular endothelial growth factor receptor kdr-like.
     
 0.699
sema3c
Semaphorin 3C.
    
 
 0.645
nrp1
Neuropilin 1.
  
 
0.628
flt3
Fms related tyrosine kinase 3.
     
 0.612
pdgfra
Platelet derived growth factor receptor alpha.
     
 0.612
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.