STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cert1Ceramide transporter 1. (623 aa)    
Predicted Functional Partners:
csnk1g1
Casein kinase 1 gamma 1.
    
 0.729
LOC114844366
Casein kinase I-like.
    
 0.729
csnk1g2
Casein kinase 1 gamma 2.
    
 0.729
LOC114855878
Vesicle-associated membrane protein-associated protein B-like.
    
 0.589
vapa
VAMP associated protein A.
    
 0.589
VAPB
VAMP associated protein B and C.
    
 0.576
ENSBSLP00000002435
annotation not available
    
 0.519
mospd1
Motile sperm domain containing 1.
    
 0.519
stard3
StAR related lipid transfer domain containing 3.
      
 0.441
star
Steroidogenic acute regulatory protein.
      
 0.438
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.