STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR1WD repeat domain 1. (630 aa)    
Predicted Functional Partners:
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 
 0.952
LOC114854321
Actin, cytoplasmic 2.
   
 0.870
actb
Actin beta.
   
 0.870
acta1
Actin alpha 1, skeletal muscle.
   
 0.870
ACTA1
Actin, alpha cardiac.
   
 0.870
acta2
Actin alpha 2, smooth muscle.
   
 0.870
ACTC1
Actin alpha cardiac muscle 1.
   
 0.870
LOC114861411
Actin, cytoplasmic.
   
 0.869
LOC114866970
Beta-centractin.
   
 0.867
LOC114851069
Actin-related protein 3.
   
 0.858
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.