sart3 protein (Betta splendens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

sart3

Spliceosome associated factor 3, U4/U6 recycling protein. (954 aa)

Predicted Functional Partners:

lsm6

0.999

lsm2

0.999

lsm5

0.999

lsm4

0.999

lsm8

0.999

lsm7

0.999

prpf4

0.994

c13h19orf54

0.986

lsm3

0.986

ppih

0.956

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
c13h19orf54	lsm2	ENSBSLP00000008381	ENSBSLP00000000773	Chromosome 13 C19orf54 homolog.	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.996
c13h19orf54	lsm4	ENSBSLP00000008381	ENSBSLP00000022904	Chromosome 13 C19orf54 homolog.	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.991
c13h19orf54	lsm5	ENSBSLP00000008381	ENSBSLP00000005106	Chromosome 13 C19orf54 homolog.	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.995
c13h19orf54	lsm6	ENSBSLP00000008381	ENSBSLP00000000479	Chromosome 13 C19orf54 homolog.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.993
c13h19orf54	lsm7	ENSBSLP00000008381	ENSBSLP00000031023	Chromosome 13 C19orf54 homolog.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.991
c13h19orf54	lsm8	ENSBSLP00000008381	ENSBSLP00000023676	Chromosome 13 C19orf54 homolog.	LSM8 homolog, U6 small nuclear RNA associated.	0.991
c13h19orf54	ppih	ENSBSLP00000008381	ENSBSLP00000006021	Chromosome 13 C19orf54 homolog.	Peptidylprolyl isomerase H.	0.956
c13h19orf54	prpf4	ENSBSLP00000008381	ENSBSLP00000027899	Chromosome 13 C19orf54 homolog.	pre-mRNA processing factor 4.	0.981
c13h19orf54	sart3	ENSBSLP00000008381	ENSBSLP00000005903	Chromosome 13 C19orf54 homolog.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.986
lsm2	c13h19orf54	ENSBSLP00000000773	ENSBSLP00000008381	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	Chromosome 13 C19orf54 homolog.	0.996
lsm2	lsm3	ENSBSLP00000000773	ENSBSLP00000019327	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm2	lsm4	ENSBSLP00000000773	ENSBSLP00000022904	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm2	lsm5	ENSBSLP00000000773	ENSBSLP00000005106	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm2	lsm6	ENSBSLP00000000773	ENSBSLP00000000479	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm2	lsm7	ENSBSLP00000000773	ENSBSLP00000031023	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm2	lsm8	ENSBSLP00000000773	ENSBSLP00000023676	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM8 homolog, U6 small nuclear RNA associated.	0.999
lsm2	ppih	ENSBSLP00000000773	ENSBSLP00000006021	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	Peptidylprolyl isomerase H.	0.991
lsm2	prpf4	ENSBSLP00000000773	ENSBSLP00000027899	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	pre-mRNA processing factor 4.	0.997
lsm2	sart3	ENSBSLP00000000773	ENSBSLP00000005903	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.999
lsm3	lsm2	ENSBSLP00000019327	ENSBSLP00000000773	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999