STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000006183annotation not available (88 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.966
LOC114851246
Platelet glycoprotein Ib alpha chain-like.
    
 0.869
frem1
FRAS1 related extracellular matrix 1.
    
 0.810
LOC114845546
Leucine-rich repeat-containing protein 17-like.
    
 0.796
gle1
GLE1 RNA export mediator.
   
 0.754
nup214
Nucleoporin 214.
    
 0.725
aaas
Aladin WD repeat nucleoporin.
    
 0.724
ENSBSLP00000022601
Glycoprotein Ib platelet subunit beta.
   
 0.720
ENSBSLP00000023057
Glycoprotein IX (platelet).
   
 0.714
rps28
Ribosomal protein S28.
   
  0.690
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.