STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865736Protein argonaute-2. (875 aa)    
Predicted Functional Partners:
dicer1
Dicer 1, ribonuclease III.
   
 0.967
drosha
Drosha ribonuclease III.
   
 0.917
tarbp2
TARBP2 subunit of RISC loading complex.
    
 0.908
LOC114846152
Trinucleotide repeat-containing gene 6B protein-like.
    
 0.897
LOC114860122
Trinucleotide repeat-containing gene 6B protein-like.
    
 0.881
prkra
Protein activator of interferon induced protein kinase EIF2AK2.
    
 0.870
dhx9
DExH-box helicase 9.
   
 0.858
tnrc6a
Trinucleotide repeat containing adaptor 6A.
    
 0.844
LOC114859777
Trinucleotide repeat-containing gene 6C protein-like.
    
 0.844
LOC114855885
Trinucleotide repeat-containing gene 6C protein-like.
    
 0.844
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.