STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
retreg2Reticulophagy regulator family member 2. (575 aa)    
Predicted Functional Partners:
eif6
Eukaryotic translation initiation factor 6.
   
 0.971
gnl2
G protein nucleolar 2.
   
 0.956
rsl24d1
Ribosomal L24 domain containing 1.
   
 0.947
rpl23a
Ribosomal protein L23a.
   
 0.944
nmd3
NMD3 ribosome export adaptor.
   
 
 0.942
mrto4
MRT4 homolog, ribosome maturation factor.
   
 0.915
LOC114859229
Proliferation-associated protein 2G4-like.
   
 0.913
pa2g4
Proliferation-associated 2G4.
   
 0.913
gtpbp4
GTP binding protein 4.
   
 
 0.908
gnl3l
G protein nucleolar 3 like.
   
 0.896
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.