STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spp2Secreted phosphoprotein 2. (161 aa)    
Predicted Functional Partners:
LOC114854566
Insulin-like growth factor-binding protein 1.
   
    0.773
fga
Fibrinogen alpha chain.
   
  
 0.733
apom
Apolipoprotein M.
   
  
 0.727
hgd
Homogentisate 1,2-dioxygenase.
   
    0.694
LOC114869287
Alpha-2-antiplasmin-like.
   
 
  0.684
LOC114860472
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.681
LOC114845431
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.681
LOC114865895
Tetranectin-like.
   
 
 0.659
LOC114844190
Vitamin K-dependent protein C-like.
   
 
  0.659
LOC114842615
Tetranectin-like.
   
 
 0.659
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.