STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d23TBC1 domain family member 23. (694 aa)    
Predicted Functional Partners:
washc4
WASH complex subunit 4.
   
 
 0.938
washc5
WASH complex subunit 5.
     
 0.933
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
     
 0.931
ENSBSLP00000027102
annotation not available
     
 0.930
washc1
WASH complex subunit 1.
     
 0.930
LOC114870425
WASH complex subunit 2-like.
     
 0.922
SNX27
Sorting nexin 27.
     
 0.838
LOC114865403
Sorting nexin-27-like.
     
 0.838
snx17
Sorting nexin 17.
     
 0.769
LOC114869104
capZ-interacting protein-like.
     
 0.746
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.