STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842455Carboxypeptidase O-like. (403 aa)    
Predicted Functional Partners:
f2
Coagulation factor II, thrombin.
  
 0.898
c5
Complement C5.
   
 0.741
LOC114870387
Alpha-1-antitrypsin-like protein GS55-MS.
   
 
  0.628
lxn
Latexin.
    
 
 0.608
LOC114849358
Plasminogen-like.
  
 0.558
LOC114852151
Chymotrypsin A-like.
  
 0.533
LOC114852777
Chymotrypsin B-like.
  
 0.533
cpn1
Carboxypeptidase N subunit 1.
   
 
 0.528
serpind1
Serpin family D member 1.
   
 
 0.522
LOC114844190
Vitamin K-dependent protein C-like.
  
 0.500
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.