STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849875Lysosomal acid phosphatase-like. (386 aa)    
Predicted Functional Partners:
nudt12
Nudix hydrolase 12.
    
  0.842
acp1
Acid phosphatase 1.
     
 0.842
acp5
Acid phosphatase 5, tartrate resistant.
   
 
 0.838
LOC114866091
Ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like.
     
 0.812
acp7
Acid phosphatase 7, tartrate resistant (putative).
   
 
 0.786
enpp2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
     
 0.746
plk4
Polo like kinase 4.
    
 0.591
cpped1
Calcineurin like phosphoesterase domain containing 1.
   
 
 0.589
PLK1
Polo like kinase 1.
    
 0.540
plk2
Polo like kinase 2.
    
 0.540
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.