STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870260Gap junction alpha-3 protein-like. (475 aa)    
Predicted Functional Partners:
LOC114849778
Gap junction Cx32.7 protein-like.
  
 
0.934
LOC114849781
Gap junction Cx32.2 protein-like.
  
 
0.934
GJE1
Gap junction protein epsilon 1.
     
0.933
LOC114849779
Gap junction Cx32.2 protein.
    
0.932
gjc2
Gap junction protein gamma 2.
    
0.932
LOC114870293
Gap junction beta-2 protein-like.
  
 
0.931
LOC114846457
Gap junction gamma-1 protein-like.
    
0.930
LOC114847367
Gap junction beta-2 protein-like.
  
 
0.930
LOC114865988
Gap junction alpha-4 protein-like.
  
  
 
0.928
LOC114844183
Gap junction gamma-1 protein-like.
   
 
0.928
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.