STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timmdc1Translocase of inner mitochondrial membrane domain containing 1. (321 aa)    
Predicted Functional Partners:
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
    
 0.999
ENSBSLP00000053129
NADH:ubiquinone oxidoreductase complex assembly factor 4.
   
 0.999
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
   
 0.990
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
 0.988
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
    
 0.988
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
 0.988
ecsit
ECSIT signaling integrator.
    
 0.987
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7.
    
 0.985
ndufb10
NADH:ubiquinone oxidoreductase subunit B10.
    
 0.985
ndufb8
NADH:ubiquinone oxidoreductase subunit B8.
    
 0.985
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.