STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000007467Indian hedgehog signaling molecule b. (401 aa)    
Predicted Functional Partners:
ptch2
Patched 2.
   
 0.960
ptch1
Patched 1.
   
 0.955
hhip
Hedgehog interacting protein.
    
 0.954
disp1
Dispatched RND transporter family member 1.
   
 0.951
boc
BOC cell adhesion associated, oncogene regulated.
    
 0.935
LOC114868355
Cell adhesion molecule-related/down-regulated by oncogenes-like.
    
 0.935
vps52
VPS52 subunit of GARP complex.
    
 0.912
vps54
VPS54 subunit of GARP complex.
    
 0.911
vps53
VPS53 subunit of GARP complex.
    
 0.905
LOC114867283
Growth arrest-specific protein 1-like.
    
 0.894
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.