STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114845751X-linked retinitis pigmentosa GTPase regulator-like. (510 aa)    
Predicted Functional Partners:
ran
RAN, member RAS oncogene family.
   
 0.957
adgrd1
Adhesion G protein-coupled receptor D1.
   
 0.957
ENSBSLP00000001837
RPGR interacting protein 1.
    
 
 0.940
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.930
LOC114854174
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
 
 0.879
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like.
    
 
 0.879
ranbp1
RAN binding protein 1.
   
 0.847
rpgrip1l
RPGRIP1 like.
    
 
 0.769
LOC114853535
Importin subunit alpha-5.
   
 
 0.735
kpnb1
Karyopherin subunit beta 1.
    
 
 0.735
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.