STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855635Haloacid dehalogenase-like hydrolase domain-containing 5. (413 aa)    
Predicted Functional Partners:
ephx2
Epoxide hydrolase 2.
  
 
 0.890
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
 
 0.813
kmo
Kynurenine 3-monooxygenase.
     
 0.787
pgs1
Phosphatidylglycerophosphate synthase 1.
    
  0.787
atp5f1d
ATP synthase F1 subunit delta.
  
 
 0.697
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.694
pnpo
Pyridoxamine 5'-phosphate oxidase.
  
 
 0.675
psat1
Phosphoserine aminotransferase 1.
  
 
 0.653
LOC114863202
Phosphatidate cytidylyltransferase 2-like.
    
  0.653
LOC114862760
Phosphatidate cytidylyltransferase 2-like.
    
  0.653
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.