STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef1Rho guanine nucleotide exchange factor 1. (1103 aa)    
Predicted Functional Partners:
LOC114860741
Guanine nucleotide-binding protein subunit alpha-13-like.
    
 0.944
LOC114845814
Guanine nucleotide-binding protein subunit alpha-13-like.
    
 0.935
gna12
G protein subunit alpha 12.
    
 0.935
LOC114858233
Rho-related GTP-binding protein RhoA-C-like.
   
 0.918
LOC114847133
Rho guanine nucleotide exchange factor 7-like.
    
 0.853
LOC114846687
Rho guanine nucleotide exchange factor 7-like.
    
 0.853
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor 6.
    
 0.853
LOC114855843
Rho-related GTP-binding protein RhoA-B.
   
 0.813
LOC114859359
Rho-related GTP-binding protein RhoA-B-like.
   
 0.813
LOC114858620
Rho-related GTP-binding protein RhoA-D-like.
   
 0.813
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.