STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHDRBS3KH RNA binding domain containing, signal transduction associated 3. (340 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator 1.
    
 
 0.644
med4
Mediator complex subunit 4.
   
   0.642
grb2
Growth factor receptor bound protein 2.
    
 
 0.639
med31
Mediator complex subunit 31.
    
   0.636
med23
Mediator complex subunit 23.
    
   0.636
med14
Mediator complex subunit 14.
    
   0.636
med29
Mediator complex subunit 29.
    
   0.636
med17
Mediator complex subunit 17.
    
   0.636
fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
 0.632
LOC114849057
Tyrosine-protein kinase fyna.
    
 0.632
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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