STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl45Mitochondrial ribosomal protein L45. (315 aa)    
Predicted Functional Partners:
mrpl15
Mitochondrial ribosomal protein L15.
   
   0.982
mrpl22
Mitochondrial ribosomal protein L22.
   
 
 0.966
mrps25
Mitochondrial ribosomal protein S25.
   
 
 0.965
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.965
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.963
mrpl41
Mitochondrial ribosomal protein L41.
   
 0.963
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.961
mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.961
mrpl11
Mitochondrial ribosomal protein L11.
   
 0.960
dap3
Death associated protein 3.
   
 
 0.958
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.