STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd2aMajor facilitator superfamily domain containing 2A. (529 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.733
tk1
Thymidine kinase 1.
    
  0.719
cstf3
Cleavage stimulation factor subunit 3.
    
  0.703
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.672
NT5E
5'-nucleotidase-like.
    
 0.672
LOC114843158
Glyceraldehyde-3-phosphate dehydrogenase 2.
    
 0.672
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
  0.565
LOC114869905
Ribonucleoside-diphosphate reductase large subunit-like.
    
  0.564
LOC114868225
Ribonucleoside-diphosphate reductase large subunit.
    
  0.564
nme7
NME/NM23 family member 7.
    
  0.542
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.