STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snrpaSmall nuclear ribonucleoprotein polypeptide A. (271 aa)    
Predicted Functional Partners:
snrpc
Small nuclear ribonucleoprotein polypeptide C.
   
 0.992
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.992
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.991
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.991
snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.991
ENSBSLP00000050458
Small nuclear ribonucleoprotein D3 polypeptide, like.
   
 0.990
prpf6
pre-mRNA processing factor 6.
   
 0.989
ENSBSLP00000048522
Small nuclear ribonucleoprotein polypeptide G.
   
 0.989
phf5a
PHD finger protein 5A.
   
 0.988
sf3a2
Splicing factor 3a subunit 2.
   
 0.987
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.