STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nedd1NEDD1 gamma-tubulin ring complex targeting factor. (663 aa)    
Predicted Functional Partners:
LOC114867448
Mitotic-spindle organizing protein 2-like.
    
 0.979
tubgcp5
Tubulin gamma complex associated protein 5.
    
 0.948
tubgcp4
Tubulin gamma complex associated protein 4.
    
 0.946
tubg1
Tubulin gamma 1.
    
 0.940
tubd1
Tubulin delta 1.
    
 0.940
tubgcp3
Tubulin gamma complex associated protein 3.
    
 0.912
tubgcp6
Tubulin gamma complex associated protein 6.
    
 0.911
haus6
HAUS augmin like complex subunit 6.
   
 0.876
tubgcp2
Tubulin gamma complex associated protein 2.
   
 0.870
plk4
Polo like kinase 4.
    
 0.867
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.