STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAV1Vav guanine nucleotide exchange factor 1. (790 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor bound protein 2.
    
0.895
plcg1
Phospholipase C gamma 1.
   
 0.861
LOC114841959
B-cell linker protein-like.
   
 0.860
LOC114861410
Phosphatidylinositol 3-kinase regulatory subunit alpha-like.
    
 
0.803
LOC114844064
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
    
 
0.802
LOC114855655
Cell division control protein 42 homolog.
   
 0.802
LOC114854785
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
    
 
0.802
LOC114859401
Cell division control protein 42 homolog.
   
 0.802
ENSBSLP00000050713
annotation not available
    
 0.785
LOC114866931
Tyrosine-protein kinase SYK-like.
   
 0.774
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.