STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tertTelomerase reverse transcriptase. (1123 aa)    
Predicted Functional Partners:
tep1
Telomerase associated protein 1.
    
 0.995
smg6
SMG6 nonsense mediated mRNA decay factor.
   
 0.994
LOC114857554
Uncharacterized LOC114857554.
    
 0.993
pot1
Protection of telomeres 1.
    
 0.993
smg5
SMG5 nonsense mediated mRNA decay factor.
   
 0.992
smg7
SMG7 nonsense mediated mRNA decay factor.
   
 0.992
dkc1
Dyskerin pseudouridine synthase 1.
    
 0.984
wrap53
WD repeat containing antisense to TP53.
    
 0.972
apaf1
Apoptotic peptidase activating factor 1.
    
 0.972
nhp2
NHP2 ribonucleoprotein.
    
 0.969
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.