STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf335Zinc finger protein 335. (1587 aa)    
Predicted Functional Partners:
sass6
SAS-6 centriolar assembly protein.
    
 0.586
ENSBSLP00000048337
annotation not available
    
  0.578
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.564
tab1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
     
 0.550
ankle2
Ankyrin repeat and LEM domain containing 2.
    
 
 0.535
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
 0.516
bard1
BRCA1 associated RING domain 1.
    
  0.516
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.505
cnot6l
CCR4-NOT transcription complex subunit 6 like.
    
  0.499
cnot6
CCR4-NOT transcription complex subunit 6.
    
  0.499
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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