STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmnb1Lamin B1. (605 aa)    
Predicted Functional Partners:
LOC114854165
lamin-B2-like.
  
 
0.871
ENSBSLP00000003285
annotation not available
    
  0.846
LOC114847117
Granzyme B-like.
    
  0.819
LOC114847116
Granzyme B-like.
    
  0.819
LOC114859472
Lamina-associated polypeptide 2, isoforms beta/gamma-like.
    
 0.803
lmna
Lamin A/C.
     
0.800
LOC114854662
Granzyme-like protein 1.
    
  0.797
LOC114854663
Granzyme B-like.
    
  0.797
ENSBSLP00000005310
annotation not available
    
  0.797
LOC114869172
Barrier-to-autointegration factor.
   
 0.795
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.