STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpgs2Tubulin polyglutamylase complex subunit 2. (292 aa)    
Predicted Functional Partners:
ttll1
Tubulin tyrosine ligase like 1.
   
 0.944
nicn1
Nicolin 1.
    
 0.906
lrrc49
Leucine rich repeat containing 49.
    
 0.905
c6h11orf49
Chromosome 6 C11orf49 homolog.
    
   0.853
tpgs1
Tubulin polyglutamylase complex subunit 1.
    
 0.829
ttl
Tubulin tyrosine ligase.
   
 0.801
ttll10
Tubulin tyrosine ligase like 10.
   
  0.570
LOC114856389
Tubulin monoglycylase TTLL3-like.
   
  0.570
ttll2
Tubulin tyrosine ligase like 2.
   
  0.570
ttll5
Tubulin tyrosine ligase like 5.
   
  0.570
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.