STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114869986Cell surface glycoprotein MUC18-like. (592 aa)    
Predicted Functional Partners:
LOC114866462
Rho-related GTP-binding protein RhoF-like.
    
 0.521
lama4
Laminin subunit alpha 4.
   
 0.520
ENSBSLP00000045169
Laminin, alpha 5.
   
 0.520
PTK7
Protein tyrosine kinase 7 (inactive).
    
 
0.504
LOC114869235
Rho-related GTP-binding protein RhoG-like.
    
  0.473
LOC114864564
Rho-related GTP-binding protein RhoG-like.
    
  0.473
nhs
NHS actin remodeling regulator.
    
  0.460
ENSBSLP00000006974
Nance-Horan syndrome a (congenital cataracts and dental anomalies).
    
  0.460
HGFAC
HGF activator.
    
  0.459
habp2
Hyaluronan binding protein 2.
    
  0.459
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.