STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114856798Carnitine O-palmitoyltransferase 1, liver isoform-like. (791 aa)    
Predicted Functional Partners:
cpt2
Carnitine palmitoyltransferase 2.
  
 
0.871
LOC114863154
long-chain-fatty-acid--CoA ligase 1-like.
     
 0.866
acsl3
acyl-CoA synthetase long chain family member 3.
   
 
 0.865
acacb
acetyl-CoA carboxylase beta.
     
 0.864
LOC114863938
long-chain-fatty-acid--CoA ligase 4-like.
   
 
 0.854
LOC114843998
long-chain-fatty-acid--CoA ligase 3-like.
   
 
 0.854
acsl5
acyl-CoA synthetase long chain family member 5.
     
 0.853
LOC114857612
Carnitine O-palmitoyltransferase 1, liver isoform-like.
  
 
 
0.853
acsl1
acyl-CoA synthetase long chain family member 1.
     
 0.848
ACSL1
long-chain-fatty-acid--CoA ligase 1-like.
     
 0.848
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.