STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857501Protein FAM3C-like. (239 aa)    
Predicted Functional Partners:
pomt1
Protein O-mannosyltransferase 1.
     
 0.729
LOC114865256
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
     
 0.610
mgat1
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
     
 0.610
eogt
EGF domain specific O-linked N-acetylglucosamine transferase.
     
 0.608
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.608
dag1
Dystroglycan 1.
     
 0.604
LOC114858877
Dystroglycan-like.
     
 0.604
LOC114869836
Stromal cell-derived factor 2-like.
     
 0.527
sdf2l1
Stromal cell derived factor 2 like 1.
     
 0.527
LOC114864146
Beta-1,4-galactosyltransferase 1-like.
    
 0.448
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.