Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
hacd13-hydroxyacyl-CoA dehydratase 1. (242 aa)    
Predicted Functional Partners:
tecr
trans-2,3-enoyl-CoA reductase.
   
 0.984
LOC114861094
Very-long-chain enoyl-CoA reductase-like.
   
 0.984
LOC114854026
Very-long-chain enoyl-CoA reductase-like.
   
 0.984
LOC114856970
Very-long-chain 3-oxoacyl-CoA reductase-A-like.
   
 0.977
hsd17b12
Hydroxysteroid 17-beta dehydrogenase 12.
   
 0.977
LOC114869756
Very-long-chain 3-oxoacyl-CoA reductase-like.
   
 0.977
xpo1
Exportin 1.
    
 
 0.819
LOC114870474
Exportin-1.
    
 
 0.819
hsdl1
Hydroxysteroid dehydrogenase like 1.
   
 0.788
hsd17b3
Hydroxysteroid 17-beta dehydrogenase 3.
   
 0.788
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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