STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadd45gip1GADD45G interacting protein 1. (230 aa)    
Predicted Functional Partners:
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.974
mrpl11
Mitochondrial ribosomal protein L11.
   
 
 0.968
mrpl58
Mitochondrial ribosomal protein L58.
   
 
 0.968
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.966
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.963
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.963
mrpl28
Mitochondrial ribosomal protein L28.
   
   0.960
mrpl24
Mitochondrial ribosomal protein L24.
   
   0.959
mrpl4
Mitochondrial ribosomal protein L4.
   
   0.956
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.956
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.