STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862424Cardiomyopathy-associated protein 5-like. (1658 aa)    
Predicted Functional Partners:
ENSBSLP00000021774
annotation not available
   
 
 0.633
nrap
Nebulin related anchoring protein.
   
 
 0.627
pask
PAS domain containing serine/threonine kinase.
    
 0.574
rps27a
Ribosomal protein S27a.
    
  0.525
LOC114848734
Trichohyalin-like.
   
  0.517
dtnbp1
Dystrobrevin binding protein 1.
    
 
 0.489
zfand4
Zinc finger AN1-type containing 4.
    
  0.483
ccdc57
Coiled-coil domain containing 57.
    
 
 0.478
ccser2
Coiled-coil serine rich protein 2.
  
     0.474
LOC114861037
M-protein, striated muscle-like.
   
  0.472
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.