Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000009643annotation not available (348 aa)    
Predicted Functional Partners:
b4galnt4
beta-1,4-N-acetyl-galactosaminyltransferase 4.
     
 0.902
LOC114852618
Carbohydrate sulfotransferase 8-like.
  
  
 
0.902
LOC114857690
beta-1,4-N-acetylgalactosaminyltransferase 3-like.
     
 0.901
pald1
Phosphatase domain containing paladin 1.
      
 0.674
LOC114870737
Gonadotropin subunit beta-2.
     
  0.667
tmed9
Transmembrane p24 trafficking protein 9.
    
   0.666
LOC114858849
Transmembrane emp24 domain-containing protein 4-like.
    
   0.666
phkb
Phosphorylase kinase regulatory subunit beta.
      
 0.662
ENSBSLP00000001947
annotation not available
    
   0.659
tmed2
Transmembrane p24 trafficking protein 2.
    
   0.659
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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