STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmeff2Transmembrane protein with EGF like and two follistatin like domains 2. (376 aa)    
Predicted Functional Partners:
mad2l2
Mitotic arrest deficient 2 like 2.
    
   0.582
ENSBSLP00000014131
Growth differentiation factor 3.
    
 0.468
LOC114844959
Bone morphogenetic protein 2-A-like.
    
 0.466
LOC114850192
Left-right determination factor 2-like.
    
 0.442
LOC114864697
Transforming growth factor beta-2 proprotein-like.
    
 0.439
tgfb2
Transforming growth factor beta 2.
    
 0.439
gdf11
Growth differentiation factor 11.
    
 0.417
gdf5
Growth differentiation factor 5.
    
 0.417
LOC114856215
Growth/differentiation factor 5-like.
    
 0.417
bmp15
Bone morphogenetic protein 15.
    
 0.417
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.