Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
atg16l1Autophagy related 16 like 1. (621 aa)    
Predicted Functional Partners:
atg12
Autophagy related 12.
    
 0.998
atg5
Autophagy related 5.
   
 0.998
atg3
Autophagy related 3.
   
 0.997
wipi2
WD repeat domain, phosphoinositide interacting 2.
   
 0.994
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.994
rb1cc1
RB1 inducible coiled-coil 1.
   
 0.993
LOC114864648
Ras-related protein Rab-33B-like.
    
 0.989
ENSBSLP00000001361
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.979
gabarapl2
GABA type A receptor associated protein like 2.
    
 0.979
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.979
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.