Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dtwd2DTW domain containing 2. (285 aa)    
Predicted Functional Partners:
dtwd1
DTW domain containing 1.
      
 0.796
tsr3
TSR3 ribosome maturation factor.
      
 0.791
dus2
Dihydrouridine synthase 2.
      
 0.784
dus4l
Dihydrouridine synthase 4 like.
   
  
 0.667
eipr1
EARP complex and GARP complex interacting protein 1.
      
 0.647
trmt1
tRNA methyltransferase 1.
      
 0.644
ENSBSLP00000026673
MyoD family inhibitor domain containing.
      
 0.635
brix1
Biogenesis of ribosomes BRX1.
   
  
 0.554
msl1
MSL complex subunit 1.
      
 0.532
vezt
Vezatin, adherens junctions transmembrane protein.
     
 0.528
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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