Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846462Noggin-2-like. (212 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.939
ENSBSLP00000010509
Noggin 1.
  
  
 
0.904
NOG
Noggin.
  
  
 
0.903
LOC114858325
Bone morphogenetic protein 7-like.
    
 0.868
bmp2
Bone morphogenetic protein 2.
    
 0.864
bmp6
Bone morphogenetic protein 6.
    
 0.860
LOC114867783
Bone morphogenetic protein 2-like.
    
 0.835
bmp5
Bone morphogenetic protein 5.
    
 0.796
LOC114846039
Bone morphogenetic protein 2-like.
    
 0.795
LOC114845015
Bone morphogenetic protein 2-like.
    
 0.795
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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