STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl6ip6ADP ribosylation factor like GTPase 6 interacting protein 6. (153 aa)    
Predicted Functional Partners:
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.625
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.625
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
   0.625
med29
Mediator complex subunit 29.
      
 0.538
rftn2
Raftlin family member 2.
      
 0.527
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.489
fam177a1
Family with sequence similarity 177 member A1.
      
 0.461
LOC114869975
V-type proton ATPase catalytic subunit A-like.
      
 0.442
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.