STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114852186Isocitrate dehydrogenase [NADP], mitochondrial-like. (293 aa)    
Predicted Functional Partners:
cs
Citrate synthase.
  
 0.968
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
  
 
 0.951
aco1
Aconitase 1.
  
 0.942
ireb2
Iron responsive element binding protein 2.
  
 0.942
idh3b
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta.
  
 0.933
idh3g
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma.
  
 0.933
got2
Glutamic-oxaloacetic transaminase 2.
   
 0.919
LOC114852150
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like.
  
 0.917
LOC114856960
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial.
  
 0.917
LOC114860164
Aconitate hydratase, mitochondrial-like.
  
 0.916
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.