Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860995Signal transducer and activator of transcription 5B-like. (785 aa)    
Predicted Functional Partners:
LOC114863191
Tyrosine-protein kinase JAK2-like.
   
 0.976
LOC114866765
Tyrosine-protein kinase JAK2-like.
   
 0.976
LOC114853312
Melanoma receptor tyrosine-protein kinase-like.
    
 0.961
egfr
Epidermal growth factor receptor.
    
 0.961
LOC114843967
Receptor tyrosine-protein kinase erbB-4-like.
    
 0.961
LOC114847230
Receptor tyrosine-protein kinase erbB-4-like.
    
 0.961
stat3
Signal transducer and activator of transcription 3.
    
0.960
jak1
Janus kinase 1.
   
 0.933
tyk2
Tyrosine kinase 2.
   
 0.931
irf9
Interferon regulatory factor 9.
    
 0.921
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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