Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114847505N-chimaerin-like. (334 aa)    
Predicted Functional Partners:
hemk1
HemK methyltransferase family member 1.
    
   0.638
nck1
NCK adaptor protein 1.
    
 0.631
nck2
NCK adaptor protein 2.
    
 0.631
cav2
Caveolin 2.
     
 0.612
LOC114855655
Cell division control protein 42 homolog.
    
 0.606
LOC114859401
Cell division control protein 42 homolog.
    
 0.606
LOC114851301
Active breakpoint cluster region-related protein-like.
   
 0.571
ABR
ABR activator of RhoGEF and GTPase.
   
 0.571
LOC114866399
Breakpoint cluster region protein-like.
   
 0.571
slc31a2
Solute carrier family 31 member 2.
      
 0.508
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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