STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc13Zinc finger DHHC-type containing 13. (651 aa)    
Predicted Functional Partners:
htt
Huntingtin.
    
 
 0.647
gtf2h4
General transcription factor IIH subunit 4.
   
 
  0.622
zdhhc21
Zinc finger DHHC-type containing 21.
      
0.461
zdhhc4
Zinc finger DHHC-type containing 4.
      
0.461
LOC114848660
Vacuolar protein 8-like.
   
  
 0.437
thoc2
THO complex 2.
   
  
 0.436
zdhhc6
Zinc finger DHHC-type containing 6.
      
0.436
ppt1
Palmitoyl-protein thioesterase 1.
      
 0.432
stx17
Syntaxin 17.
    
 
 0.424
zdhhc24
Zinc finger DHHC-type containing 24.
      
0.418
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.