STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c14h17orf49Chromosome 14 C17orf49 homolog. (203 aa)    
Predicted Functional Partners:
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.966
LOC114860116
Nucleosome-remodeling factor subunit BPTF-like.
    
 0.966
BPTF
Bromodomain PHD finger transcription factor.
    
 0.966
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
  0.955
baz1a
Bromodomain adjacent to zinc finger domain 1A.
     
 0.938
LOC114843874
chromodomain-helicase-DNA-binding protein 8-like.
    
  0.938
baz1b
Bromodomain adjacent to zinc finger domain 1B.
     
 0.936
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
     
 0.930
ruvbl2
RuvB like AAA ATPase 2.
   
 
  0.928
LOC114849347
Protein max.
   
  0.926
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.