Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc174Coiled-coil domain containing 174. (558 aa)    
Predicted Functional Partners:
eif4a3
Eukaryotic translation initiation factor 4A3.
    
 
 0.956
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.933
gpatch1
G-patch domain containing 1.
    
 
 0.815
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
   0.786
dld
Dihydrolipoamide dehydrogenase.
   
    0.776
mtrex
Mtr4 exosome RNA helicase.
    
 
 0.743
hspa5
Heat shock protein family A (Hsp70) member 5.
   
    0.723
nom1
Nucleolar protein with MIF4G domain 1.
      
 0.686
tfip11
Tuftelin interacting protein 11.
   
 
 0.681
ZNF830
Zinc finger protein 830.
   
    0.681
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.