STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem129Transmembrane protein 129. (391 aa)    
Predicted Functional Partners:
derl1
Derlin 1.
    
 0.847
ube2j2
Ubiquitin conjugating enzyme E2 J2.
    
 0.798
pex6
Peroxisomal biogenesis factor 6.
   
  0.781
selenos
Selenoprotein S.
    
  0.685
c1qtnf12
C1q and TNF related 12.
    
 0.651
derl2
Derlin 2.
    
 0.616
LOC114862997
Derlin-2-like.
    
 0.616
LOC114851360
Transitional endoplasmic reticulum ATPase-like.
   
 0.578
vcp
Valosin containing protein.
   
 0.578
yipf5
Yip1 domain family member 5.
    
  0.560
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.